Computational Chemistry - Jaroslav Koča
CEITEC MU CEITEC MU
Computational Chemistry - Jaroslav Koča

Selected publications

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2020

  • Varadi, M; Bcrrisford, J; Deshpande, M; Nair, SS; Gutmanas, A; Armstrong, D; Pravda, L; Al-Lazikani, B; Anyango, S; Barton, GJ; Berka, K; Blundell, T; Borkakoti, N; Dana, J; Das, S; Dey, S; Di Micco, P; Fraternali, F; Gibson, T; Helmer-Citterich, M; Hoksza, D; Huang, LC; Jain, R; Jubb, H; Kannas, C; Kannan, N; Koca, J; Krivak, R; Kumar, M; Levy, ED; Madeira, F; Madhusudhan, MS; Martell, HJ; MacGowan, S; McGreig, JE; Mir, S; Mukhopadhyay, A; Parca, L; Paysan-Lafosse, T; Radusky, L; Ribeiro, A; Serrano, L; Sillitoe, I; Singh, G; Skoda, P; Svobodova, R; Tyzack, J; Valencia, A; Fernandez, EV; Vranken, W; Wass, M; Thornton, J; Sternberg, M; Orengo, C; Velankar, S, 2020: PDBe-KB: a community-driven resource for structural and functional annotations. NUCLEIC ACIDS RESEARCH 48(D1), p. D344 - D353, doi: 10.1093/nar/gkz853
  • Armstrong, DR; Berrisford, JM; Conroy, MJ; Gutmanas, A; Anyango, S; Choudhary, P; Clark, AR; Dana, JM; Deshpande, M; Dunlop, R; Gane, P; Gaborova, R; Gupta, D; Haslam, P; Koca, J; Mak, L; Mir, S; Mukhopadhyay, A; Nadzirin, N; Nair, S; Paysan-Lafosse, T; Pravda, L; Sehnal, D; Salih, O; Smart, O; Tolchard, J; Varadi, M; Svobodova-Varekova, R; Zaki, H; Kleywegt, GJ; Velankar, S, 2020: PDBe: improved findability of macromolecular structure data in the PDB. NUCLEIC ACIDS RESEARCH 48(D1), p. D335 - D343, doi: 10.1093/nar/gkz990
  • Raček, T; Schindler, O; Toušek, D; Horský, V; Berka, K; Koča, J; Svobodová, R , 2020: Atomic Charge Calculator II: web-based tool for the calculation of partial atomic charges.. NUCLEIC ACIDS RESEARCH , doi: 10.1093/nar/gkaa367

2019

  • Burley, SK; Berman, HM; Bhikadiya, C; Bi, CX; Chen, L; Di Costanzo, L; Christie, C; Duarte, JM; Dutta, S; Feng, ZK; Ghosh, S; Goodsell, DS; Green, RK; Guranovic, V; Guzenko, D; Hudson, BP; Liang, YH; Lowe, R; Peisach, E; Periskova, I; Randle, C; Rose, A; Sekharan, M; Shao, CH; Tao, YP; Valasatava, Y; Voigt, M; Westbrook, J; Young, J; Zardecki, C; Zhuravleva, M; Kurisu, G; Nakamura, H; Kengaku, Y; Cho, H; Sato, J; Kim, JY; Ikegawa, Y; Nakagawa, A; Yamashita, R; Kudou, T; Bekker, GJ; Suzuki, H; Iwata, T; Yokochi, M; Kobayashi, N; Fujiwara, T; Velankar, S; Kleywegt, GJ; Anyango, S; Armstrong, DR; Berrisford, JM; Conroy, MJ; Dana, JM; Deshpande, M; Gane, P; Gaborova, R; Gupta, D; Gutmanas, A; Koca, J; Mak, L; Mir, S; Mukhopadhyay, A; Nadzirin, N; Nair, S; Patwardhan, A; Paysan-Lafosse, T; Pravda, L; Salih, O; Sehnal, D; Varadi, M; Varekova, R; Markley, JL; Hoch, JC; Romero, PR; Baskaran, K; Maziuk, D; Ulrich, EL; Wedell, JR; Yao, HY; Livny, M; Ioannidis, YE, 2019: Protein Data Bank: the single global archive for 3D macromolecular structure data. NUCLEIC ACIDS RESEARCH 47(D1), p. D520 - D528, doi: 10.1093/nar/gky949

2018

2017

2016

2015

2014

2013

2012

2011