Lecture Seminar Series

BioIT Seminar: CCSfind: A tool for chemically informed LC-IM-MS database building

About event

CCSfind, a new tool for building comprehensive databases from experimental IM-MS measurements of small molecules. CCSfind allows predicted ion species to be chosen for input chemical formulae, which are then targeted by CCSfind after parsing open source mzML input files to provide a unified set of results within a single data processing step. CCSfind can handle both chromatographically separated isomers and IM separation of isomeric ions (e.g., “protomers” or conformers of the same ion species) with simple user control over the output for new database entries in SQL format.

The lecture is part of the Bioinformatics Seminar Series, which aims to invite exciting speakers working on the current state-of-the-art bioinformatics problems.


24. 4. 2024, 16:00 - 17:00
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Online stream


Sangeeta Kumari
University of Natural Resources and Life Sciences, Vienna, AT


CEITEC MU, University Campus, Building E35, Room 211