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About event
Light microscopy is indispensable method in biological research. Microscopes are producing beautiful images from which meaningful information must be extracted. This online course is intended for biologists, who would like to learn how to obtain quantitative informations from microscopy images. Course will cover basics of standard image processing methods and in more details will be focused on analysis of big data, such as datasets from lightsheet microscopes. Different software platforms will be presented, both open source and commercials.
Course is online and free of charge, but the number of participants is limited. Zoom link will be sent after the registration confirmation.
Registration has been closed.
Programme
13. 12. 2022
09:15 - 09:30 MILAN ESNER, CEITEC MU, Brno
WELCOME, COURSE INFORMATION
09:30 - 10:30 PAVEL TOMANCAK, CEITEC MU, Brno
LIGHTSHEET MICROSCOPY
10:30 -11:30 MICHAL KOZUBEK, MUNI FI, BRNO
INTRODUCTION TO IMAGE PROCESSING
14:00 - 15:30 VLADIMIR ULMAN, CEITEC MU, MUNI FI, Brno
WORKING WITH FIJI/IMAGEJ
15:45 - 16:30 VLADIMIR ULMAN, CEITEC MU, MUNI FI, Brno
BIG DATA PLUGINS IN FIJI
14. 12. 2022
09:00 - 12:00 TAMARA MANUELIAN, ZEISS - ARIVIS
IMAGE ANALYSIS USING ARIVIS
14:00 - 17:00 FRANCO KLINGBERG, LEICA MICROSYSTEMS
IMAGE ANALYSIS USING AIVIA
15. 12. 2022
09:00 - 11:45 WOJCIECH JESIONEK, CEITEC MU, BRNO
IMAGE ANALYSIS USING IMARIS AND ZEN
12:00 - 13:00 MARVIN ALBERT, INSTITUT PASTEUR, UNIVERSITE DE PARIS CITE, IMAGE ANALYSIS HUB, PARIS
MULTI-VIEW RECONSTRUCTION OF BIG DATA