Radka Svobodová Vařeková, Ph.D.

Senior Researcher

Contact

Email:
Phone: +420 54949 4860
Research group: Computational Chemistry - Jaroslav Koča
Workplace:

19. Dec. 2017

A new CEITEC MU software provides a breakthrough in working with biological databases

Press release, Brno, December 19, 2017 A new software application that works as a virtual microscope for molecules and molecular complexes was…

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2018

2017

2016

  • Racek, T; Pazurikova, J; Varekova, RS; Geidl, S; Krenek, A; Falginella, FL; Horsky, V; Hejret, V; Koca, J, 2016: NEEMP: software for validation, accurate calculation and fast parameterization of EEM charges. JOURNAL OF CHEMINFORMATICS 8, doi: 10.1186/s13321-016-0171-1
  • Perczel, A; Atanasov, AG; Sklenar, V; Novacek, J; Papouskova, V; Kaderavek, P; Zidek, L; Kozlowski, H; Watly, J; Hecel, A; Kolkowska, P; Koca, J; Svobodova-Varekova, R; Pravda, L; Sehnal, D; Horsky, V; Geidl, S; Enriz, RD; Matejka, P; Jenistova, A; Dendisova, M; Kokaislova, A; Weissig, V; Olsen, M; Coffey, A; Ajuebor, J; Keary, R; Sanz-Gaitero, M; Raaij, MJ; McAuliffe, O; Waltenberger, B; Mocan, A; Smejkal, K; Heis, EH; Diederich, M; Musiol, R; Kosmrlj, J; Polanski, J; Jampilek, J, 2016: The Eighth Central European Conference ´´Chemistry towards Biology´´: Snapshot. MOLECULES 21(10), doi: 10.3390/molecules21101381
  • Adams, P; Aertgeerts, K; Bauer, C; Bell, JA; Berman, HM; Bhat, TN; Blaney, JM; Bolton, E; Bricogne, G; Brown, D; Burley, SK; Case, DA; Clark, KL; Darden, T; Emsley, P; Feher, VA; Feng, ZK; Groom, CR; Harris, SF; Hendle, J; Holder, T; Joachimiak, A; Kleywegt, GJ; Krojer, T; Marcotrigiano, J; Mark, AE; Markley, JL; Miller, M; Minor, W; Montelion, GT; Murshudov, G; Nakagawa, A; Nakamura, H; Nicholls, A; Nicklaus, M; Nolte, RT; Padyana, AK; Peishoff, CE; Pieniazek, S; Read, RJ; Shao, CH; Sheriff, S; Smart, O; Soisson, S; Spurlino, J; Stouch, T; Svobodova, R; Tempel, W; Terwilliger, TC; Tronrud, D; Velankar, S; Ward, SC; Warren, GL; Westbrook, JD; Williams, P; Yang, HW; Young, J, 2016: Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop. STRUCTURE 24(4), doi: 10.1016/j.str.2016.02.017
  • Ison, J; Rapacki, K; Menager, H; Kalas, M; Rydza, E; Chmura, P; Anthon, C; Beard, N; Berka, K; Bolser, D; Booth, T Bretaudeau, A; Brezovsky, J; Casadio, R; Cesareni, G; Copens, F; Cornell, M Cuccuru, G; Davidsen, K; Della Vedova, G; Dogan, T; Doppelt-Azeroual, O; Emery, L; Gasteiger, E; Gatter, T; Goldberg, T; Grosjean, M; Gruning, B; Helmer-Citterich, M; Ienasescu, H; Ioannidis, V; Jespersen, MC; Jimenz, R; Juty, N; Juvan, P; Koch, M; Laibe, C; Li, JW; Licata, L; Mareuil, F; Micetic, I; Friborg, RM; Moretti, S; Morris, C; Moller, S; Nenadic, A; Peterson, H; Profiti, G; Rice, P; Romano, P; Roncaglia, P; Saidi, R; Schafferhans, A; Schwammle, V; Smith, C; Sperotto, MM; Stockinger, H; Varekova, RS; Tosatto, SCE; de la Torre, V; Uva, P; Via, A; Yachdav, G; Zambelli, F; Vriend, G; Rost, B; Parkinson, H; Longreen, P; Brunak, S , 2016: Tools and data services registry: a community effort to document bioinformatics resources. NUCLEIC ACIDS RESEARCH 44(D1), doi: 10.1093/nar/gkv1116

2015

2012

2011

  • ELIXIR-CZ: Budování kapacit (CZ.02.1.01/0.0/0.0/16_013/0001777), Ministerstvo školství, mládeže a tělovýchovy ČR, 2017 - 2021
  • Czech National Infrastructure for Biological Data (LM2015047), Ministerstvo školství, mládeže a tělovýchovy ČR, 2016 - 2019
  • CEITEC - Central European Institute of Technology (CZ.1.05/1.1.00/02.0068), Ministerstvo školství, mládeže a tělovýchovy ČR, 2011 - 2015
  • SYLICA - Synergies of Life and Material Sciences to Create a New Future (286154), Evropská unie, 2011 - 2015
  • InterBioNet - Podpora mezinárodní a mezisektorové spolupráce ve výzkumu a vývoji v oblasti věd o živé přírodě (CZ.1.07/2.4.00/17.0042), Ministerstvo školství, mládeže a tělovýchovy ČR, 2011 - 2014
  • Molekulární a strukturní biologie vybraných cytostatik. Od mechanických studií k chemoterapii rakoviny (GD301/09/H004), Grantová agentura ČR, 2009 - 2012
  • REAKTIVACE - Výzkum reaktivace acetylcholinesterasy metodami výpočetní chemie (OVMASUN200901), Ministerstvo obrany ČR, 2009 - 2012