Prof. Zbyněk Zdráhal

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2020

• Lattova, E; Skrickova, J; Hausnerova, J; Frola, L; Kren, L; Ihnatova, I; Zdrahal, Z; Bryant, J; Popovic, M, 2020: N-Glycan profiling of lung adenocarcinoma in patients at different stages of disease. MODERN PATHOLOGY , doi: 10.1038/s41379-019-0441-3
• Dvorakova, H; Leontovyc, R; Machacek, T; O´Donoghue, AJ; Sedo, O; Zdrahal, Z; Craik, CS; Caffrey, CR; Horak, P; Mikes, L, 2020: Isoforms of Cathepsin B1 in Neurotropic Schistosomula of Trichobilharzia regenti Differ in Substrate Preferences and a Highly Expressed Catalytically Inactive Paralog Binds Cystatin. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 10, doi: 10.3389/fcimb.2020.00066
• Bernatik, O; Pejskova, P; Vyslouzil, D; Hanakova, K; Zdrahal, Z; Cajanek, L, 2020: Phosphorylation of multiple proteins involved in ciliogenesis by Tau Tubulin kinase 2. MOLECULAR BIOLOGY OF THE CELL 31(10), p. 1032 - 1046, doi: 10.1091/mbc.E19-06-0334
• Fila, J; Klodova, B; Potesil, D; Juricek, M; Sestak, P; Zdrahal, Z; Honys, D, 2020: The Beta Subunit of Nascent Polypeptide Associated Complex Plays A Role in Flowers and Siliques Development of Arabidopsis thaliana. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 21(6), doi: 10.3390/ijms21062065
• Salat, J; Mikulasek, K; Larralde, O; Formanova, PP; Chrdle, A; Haviernik, J; Elsterova, J; Teislerova, D; Palus, M; Eyer, L; Zdrahal, Z; Petrik, J; Ruzek, D, 2020: Tick-Borne Encephalitis Virus Vaccines Contain Non-Structural Protein 1 Antigen and May Elicit NS1-Specific Antibody Responses in Vaccinated Individuals. VACCINES 8(1), doi: 10.3390/vaccines8010081

2019

• Bosakova, MK; Nita, A; Gregor, T; Varecha, M; Gudernova, I; Fafilek, B; Barta, T; Basheer, N; Abraham, SP; Balek, L; Tomanova, M; Kucerova, JF; Bosak, J; Potesil, D; Zieba, J; Song, J; Konik, P; Park, S; Duran, I; Zdrahal, Z; Smajs, D; Jansen, G; Fu, Z; Ko, HW; Hampl, A; Trantirek, L; Krakow, D; Krejci, P, 2019: Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 116(10), p. 4316 - 4325, doi: 10.1073/pnas.1800338116
• Harnos, J; Canizal, MCA; Jurasek, M; Kumar, J; Holler, C; Schambony, A; Hanakova, K; Bernatik, O; Zdrahal, Z; Gomoryova, K; Gybel, T; Radaszkiewicz, TW; Kravec, M; Trantirek, L; Rynes, J; Dave, Z; Fernandez-Llamazares, AI; Vacha, R; Tripsianes, K; Hoffmann, C; Bryja, V, 2019: Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1. NATURE COMMUNICATIONS 10, doi: 10.1038/s41467-019-09651-7
• Lattova, E; Skrickova, J; Zdrahal, Z, 2019: Applicability of Phenylhydrazine Labeling for Structural Studies of Fucosylated N-Glycans. ANALYTICAL CHEMISTRY 91(13), p. 7985 - 7990, doi: 10.1021/acs.analchem.9b01321
• Kaiser, K; Gyllborg, D; Prochazka, J; Salasova, A; Kompanikova, P; Molina, FL; Laguna-Goya, R; Radaszkiewicz, T; Harnos, J; Prochazkova, M; Potesil, D; Barker, RA; Casado, AG; Zdrahal, Z; Sedlacek, R; Arenas, E; Villaescusa, JC; Bryja, V, 2019: WNT5A is transported via lipoprotein particles in the cerebrospinal fluid to regulate hindbrain morphogenesis. NATURE COMMUNICATIONS 10, doi: 10.1038/s41467-019-09298-4
• Legartova, S; Lochmanova, G; Zdrahal, Z; Kozubek, S; Sponer, J; Krepl, M; Pokorna, P; Bartova, E, 2019: DNA Damage Changes Distribution Pattern and Levels of HP1 Protein Isoforms in the Nucleolus and Increases Phosphorylation of HP1 beta-Ser88. CELLS 8(9), doi: 10.3390/cells8091097
• Lochmanova, G; Ihnatova, I; Kucharikova, H; Brabencova, S; Zachova, D; Fajkus, J; Zdrahal, Z; Fojtova, M, 2019: Different Modes of Action of Genetic and Chemical Downregulation of Histone Deacetylases with Respect to Plant Development and Histone Modifications. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 20(20), doi: 10.3390/ijms20205093
• Zeman, M; Bardy, P; Vrbovska, V; Roudnicky, P; Zdrahal, Z; Ruzickova, V; Doskar, J; Pantucek, R, 2019: New Genus Fibralongavirus in Siphoviridae Phages of Staphylococcus pseudintermedius. VIRUSES-BASEL 11(12), doi: 10.3390/v11121143
• Hanakova, K; Bernatik, O; Kravec, M; Micka, M; Kumar, J; Harnos, J; Ovesna, P; Paclikova, P; Radsetoulal, M; Potesil, D; Tripsianes, K; Cajanek, L; Zdrahal, Z; Bryja, V, 2019: Comparative phosphorylation map of Dishevelled 3 links phospho-signatures to biological outputs. CELL COMMUNICATION AND SIGNALING 17(1), doi: 10.1186/s12964-019-0470-z
• Abad, E; Garcia-Mayea, Y; Mir, C; Sebastian, D; Zorzano, A; Potesil, D; Zdrahal, Z; Lyakhovich, A; Lleonart, ME, 2019: Common Metabolic Pathways Implicated in Resistance to Chemotherapy Point to a Key Mitochondrial Role in Breast Cancer. MOLECULAR & CELLULAR PROTEOMICS 18(2), p. 231 - 244, doi: 10.1074/mcp.RA118.001102

2018

• Garlikova, Z; Silva, AC; Rabata, A; Potesil, D; Ihnatova, I; Dumkova, J; Koledova, Z; Zdrahal, Z; Vinarsky, V; Hampl, A; Pinto-do-O, P; Nascimento, DS, 2018: Generation of a Close-to-Native In Vitro System to Study Lung Cells-Extracellular Matrix Crosstalk. 24(1), p. 1 - 13, doi: 10.1089/ten.tec.2017.0283
• Verlande, A; Krafcikova, M; Potesil, D; Trantirek, L; Zdrahal, Z; Elkalaf, M; Trnka, J; Soucek, K; Rauch, N; Rauch, J; Kolch, W; Uldrijan, S, 2018: Metabolic stress regulates ERK activity by controlling KSR-RAF heterodimerization. EMBO REPORTS 19(2), p. 320 - 336, doi: 10.15252/embr.201744524
• Pekar, S; Petrakova, L; Sedo, O; Korenko, S; Zdrahal, Z, 2018: Trophic niche, capture efficiency and venom profiles of six sympatric ant-eating spider species (Araneae: Zodariidae). MOLECULAR ECOLOGY 27(4), p. 1053 - 1064, doi: 10.1111/mec.14485
• Maslanova, I; Wertheimer, Z; Sedlacek, I; Svec, P; Indrakova, A; Kovarovic, V; Schumann, P; Sproer, C; Kralova, S; Sedo, O; Kristofova, L; Vrbovska, V; Fuzik, T; Petras, P; Zdrahal, Z; Ruzickova, V; Doskar, J; Pantucek, R, 2018: Description and Comparative Genomics of Macrococcus caseolyticus subsp hominis subsp nov., Macrococcus goetzii sp nov., Macrococcus epidermidis sp nov., and Macrococcus bohemicus sp nov., Novel Macrococci From Human Clinical Material With Virulence Potential and Suspected Uptake of Foreign DNA by Natural Transformation. FRONTIERS IN MICROBIOLOGY 9, doi: 10.3389/fmicb.2018.01178
• Strakova, K; Kowalski-Jahn, M; Gybel, T; Valnohova, J; Dhople, VM; Harnos, J; Bernatik, O; Ganji, RS; Zdrahal, Z; Mulder, J; Lindskog, C; Bryja, V; Schulte, G, 2018: Dishevelled enables casein kinase 1-mediated phosphorylation of Frizzled 6 required for cell membrane localization. JOURNAL OF BIOLOGICAL CHEMISTRY 293(48), p. 18477 - 18493, doi: 10.1074/jbc.RA118.004656
• Stverakova, D; Sedo, O; Benesik, M; Zdrahal, Z; Doskar, J; Pantucek, R, 2018: Rapid Identification of Intact Staphylococcal Bacteriophages Using Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry. VIRUSES-BASEL 10(4), doi: 10.3390/v10040176
• Hanakova, K; Potesil, D; Bernatik, O; Cervenka, I; Radsetoulal, M; Bryja, V; Zdrahal, Z, 2018: SEMIQUANTITATIVE ASSESSMENT OF DISHEVELLED-3 PHOSPHORYLATION STATUS BY MASS SPECTROMETRY. HUNGARIAN JOURNAL OF INDUSTRY AND CHEMISTRY 46(1), p. 3 - 6, doi: 10.1515/hjic-2018-0002
• Abad, E; Garcia-Mayea, Y; Mir, C; Sebastian, D; Zorzano, A; Potesil, D; Zdrahal, Z; Lleonart, M; Lyakhovich, A, 2018: Antibiotics as repurposed drugs for anticancer therapy. FEBS OPEN BIO 8, p. 313 - 313
• Hafidh, S; Potesil, D; Muller, K; Fila, J; Michailidis, C; Herrmannova, A; Fecikova, J; Ischebeck, T; Valasek, LS; Zdrahal, Z; Honysa, D, 2018: Dynamics of the Pollen Sequestrome Defined by Subcellular Coupled Omics. PLANT PHYSIOLOGY 178(1), p. 258 - 282, doi: 10.1104/pp.18.00648
• Ledvinova, D; Mikulasek, K; Kucharikova, H; Brabencova, S; Fojtova, M; Zdrahal, Z; Lochmanova, G, 2018: Filter-Aided Sample Preparation Procedure for Mass Spectrometric Analysis of Plant Histones. FRONTIERS IN PLANT SCIENCE 9, doi: 10.3389/fpls.2018.01373
• Bartova, E; Lochmanova, G; Legartova, S; Suchankova, J; Fedr, R; Krejci, J; Zdrahal, Z, 2018: Irradiation by gamma-rays reduces the level of H3S10 phosphorylation and weakens the G2 phase-dependent interaction between H3S10 phosphorylation and gamma H2AX. BIOCHIMIE 154, p. 86 - 98, doi: 10.1016/j.biochi.2018.07.029
• Pekar, S; Liznarova, E; Bocanek, O; Zdrahal, Z, 2018: Venom of prey-specialized spiders is more toxic to their preferred prey: A result of prey-specific toxins. JOURNAL OF ANIMAL ECOLOGY 87(6), p. 1639 - 1652, doi: 10.1111/1365-2656.12900
• Roudnicky, P; Vorel, J; Ilgova, J; Benovics, M; Norek, A; Jedlickova, L; Mikes, L; Potesil, D; Zdrahal, Z; Dvorak, J; Gelnar, M; Kasny, M, 2018: Identification and partial characterization of a novel serpin from Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea). PARASITE 25, doi: 10.1051/parasite/2018062
• Sedo, O; Radolfova-Krizova, L; Nemec, A; Zdrahal, Z, 2018: Limitations of routine MALDI-TOF mass spectrometric identification of Acinetobacter species and remedial actions. JOURNAL OF MICROBIOLOGICAL METHODS 154, p. 79 - 85, doi: 10.1016/j.mimet.2018.10.009
• Bartova, V; Barta, J; Vlacihova, A; Sedo, O; Zdrahal, Z; Konecna, H; Stupkova, A; Svajner, J, 2018: Proteomic characterization and antifungal activity of potato tuber proteins isolated from starch production waste under different temperature regimes. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 102(24), p. 10551 - 10560, doi: 10.1007/s00253-018-9373-y
• Kaurov, I; Vancova, M; Schimanski, B; Cadena, LR; Heller, J; Bily, T; Potesil, D; Eichenberger, C; Bruce, H; Oeljeklaus, S; Warscheid, B; Zdrahal, Z; Schneider, A; Lukes, J; Hashimi, H, 2018: The Diverged Trypanosome MICOS Complex as a Hub for Mitochondrial Cristae Shaping and Protein Import. CURRENT BIOLOGY 28(21), p. 3393 - +, doi: 10.1016/j.cub.2018.09.008
• Pekar, S; Bocanek, O; Michalek, O; Petrakova, L; Haddad, CR; Sedo, O; Zdrahal, Z, 2018: Venom gland size and venom complexity-essential trophic adaptations of venomous predators: A case study using spiders. MOLECULAR ECOLOGY 27(21), p. 4257 - 4269, doi: 10.1111/mec.14859

2017

• Schmidt, JM; Greve-Poulsen, M; Damgaard, H; Sunds, AV; Zdrahal, Z; Hammershoj, M; Larsen, LB, 2017: A New Two-Step Chromatographic Procedure for Fractionation of Potato Proteins with Potato Fruit Juice and Spray-Dried Protein as Source Materials. FOOD AND BIOPROCESS TECHNOLOGY 10(11), p. 1946 - 1958, doi: 10.1007/s11947-017-1966-4
• Bočánek, O; Šedo, O; Pekár, S; Zdráhal, Z, 2017: Evaluation of sample preparation protocols for spider venom profiling by MALDI-TOF MS. TOXICON 133, p. 18 - 25, doi: 10.1016/j.toxicon.2017.04.008
• Jansen, S; Melkova, K; Trosanova, Z; Hanakova, K; Zachrdla, M; Novacek, J; Zupa, E; Zdrahal, Z; Hritz, J; Zidek, L, 2017: Quantitative mapping of microtubule-associated protein 2c (MAP2c) phosphorylation and regulatory protein 14-3-3 zeta-binding sites reveals key differences between MAP2c and its homolog Tau. JOURNAL OF BIOLOGICAL CHEMISTRY 292(16), p. 6715 - 6727, doi: 10.1074/jbc.M116.771097
• Zeman, M; Maslanova, I; Indrakova, A; Siborova, M; Mikulasek, K; Bendickova, K; Plevka, P; Vrbovska, V; Zdrahal, Z; Doskar, J; Pantucek, R, 2017: Staphylococcus sciuri bacteriophages double-convert for staphylokinase and phospholipase, mediate interspecies plasmid transduction, and package mecA gene. SCIENTIFIC REPORTS 7, doi: 10.1038/srep46319
• Salasova, A; Yokota, C; Potesil, D; Zdrahal, Z; Bryja, V; Arenas, E, 2017: A proteomic analysis of LRRK2 binding partners reveals interactions with multiple signaling components of the WNT/PCP pathway. MOLECULAR NEURODEGENERATION 12, doi: 10.1186/s13024-017-0193-9
• Grochalova, M; Konecna, H; Stejskal, K; Potesil, D; Fridrichova, D; Srbova, E; Ornerova, K; Zdrahal, Z, 2017: Deep coverage of the beer proteome. JOURNAL OF PROTEOMICS 162, p. 119 - 124, doi: 10.1016/j.jprot.2017.05.001
• Brabencova, S; Ihnatova, I; Potesil, D; Fojtova, M; Fajkus, J; Zdrahal, Z; Lochmanova, G, 2017: Variations of Histone Modification Patterns: Contributions of Inter-plant Variability and Technical Factors. FRONTIERS IN PLANT SCIENCE 8, doi: 10.3389/fpls.2017.02084
• Ilgova, J; Jedlickova, L; Dvorakova, H; Benovics, M; Mikes, L; Janda, L; Vorel, J; Roudnicky, P; Potesil, D; Zdrahal, Z; Gelnar, M; Kasny, M, 2017: A novel type I cystatin of parasite origin with atypical legumain-binding domain. SCIENTIFIC REPORTS 7, doi: 10.1038/s41598-017-17598-2

2016

• Cervenka, I; Valnohova, J; Bernatik, O; Harnos, J; Radsetoulal, M; Sedova, K; Hanakova, K; Potesil, D; Sedlackova, M; Salasova, A; Steinhart, Z; Angers, S; Schulte, G; Hampl, A; Zdrahal, Z; Bryja, V, 2016: Dishevelled is a NEK2 kinase substrate controlling dynamics of centrosomal linker proteins. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113(33), p. 9304 - 9309, doi: 10.1073/pnas.1608783113
• Sedo, O; Koran, M; Jakesova, M; Mikulikova, R; Bohac, M; Zdrahal, Z, 2016: Rapid assignment of malting barley varieties by matrix-assisted laser desorption-ionisation - Time-of-flight mass spectrometry. FOOD CHEMISTRY 206, p. 124 - 130, doi: 10.1016/j.foodchem.2016.03.056
• Lattova, E; Bryant, J; Skrickova, J; Zdrahal, Z; Popovic, M, 2016: Efficient Procedure for N-Glycan Analyses and Detection of Endo H-Like Activity in Human Tumor Specimens. JOURNAL OF PROTEOME RESEARCH 15(8), p. 2777 - 2786, doi: 10.1021/acs.jproteome.6b00346
• Sponer, JE; Sponer, J; Novakova, O; Brabec, V; Sedo, O; Zdrahal, Z; Costanzo, G; Pino, S; Saladino, R; Di Mauro, E, 2016: Emergence of the First Catalytic Oligonucleotides in a Formamide-Based Origin Scenario. CHEMISTRY-A EUROPEAN JOURNAL 22(11), p. 3572 - 3586, doi: 10.1002/chem.201503906
• Costanzo, G; Pino, S; Timperio, AM; Sponer, JE; Sponer, J; Novakova, O; Sedo, O; Zdrahal, Z; Di Mauro, E, 2016: Non-Enzymatic Oligomerization of 3 ´, 5 ´ Cyclic AMP. PLOS ONE 11(11), doi: 10.1371/journal.pone.0165723
• Kucera, J; Sedo, O; Potesil, D; Janiczek, O; Zdrahal, Z; Mandl, M, 2016: Comparative proteomic analysis of sulfur-oxidizing Acidithiobacillus ferrooxidans CCM 4253 cultures having lost the ability to couple anaerobic elemental sulfur oxidation with ferric iron reduction. RESEARCH IN MICROBIOLOGY 167(7), p. 587 - 594, doi: 10.1016/j.resmic.2016.06.009
• Mlynarikova, K; Sedo, O; Ruzicka, F; Zdrahal, Z; Hola, V; Mahelova, M, 2016: Evaluation of capacity to detect ability to form biofilm in Candida parapsilosis sensu stricto strains by MALDI-TOF MS. FOLIA MICROBIOLOGICA 61(6), p. 465 - 471, doi: 10.1007/s12223-016-0458-7
• Jedlickova, L; Dvorakova, H; Kasny, M; Ilgova, J; Potesil, D; Zdrahal, Z; Mikes, L, 2016: Major acid endopeptidases of the blood-feeding monogenean Eudiplozoon nipponicum (Heteronchoinea: Diplozoidae). PARASITOLOGY 143(4), p. 494 - 506, doi: 10.1017/S0031182015001808
• Duskova, M; Kamenik, J; Lacanin, I; Sedo, O; Zdrahal, Z, 2016: Lactic acid bacteria in cooked hams - Sources of contamination and chances of survival in the product. FOOD CONTROL 61, p. 1 - 5, doi: 10.1016/j.foodcont.2015.09.019
• Uhlikova, H; Oboril, M; Klempova, J; Sedo, O; Zdrahal, Z; Kasparovsky, T; Skladal, P; Lochman, J, 2016: Elicitin-Induced Distal Systemic Resistance in Plants is Mediated Through the Protein-Protein Interactions Influenced by Selected Lysine Residues. FRONTIERS IN PLANT SCIENCE 7, doi: 10.3389/fpls.2016.00059
• Hafidh, S; Potesil, D; Fila, J; Capkova, V; Zdrahal, Z; Honys, D, 2016: Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization. GENOME BIOLOGY 17, doi: 10.1186/s13059-016-0928-x

2015

• Kozakova, L; Vondrova, L; Stejskal, K; Charalabous, P; Kolesar, P; Lehmann, AR; Uldrijan, S; Sanderson, CM; Zdrahal, Z; Palecek, JJ, 2015: The melanoma-associated antigen 1 (MAGEA1) protein stimulates the E3 ubiquitin-ligase activity of TRIM31 within a TRIM31-MAGEA1-NSE4 complex. CELL CYCLE 14(6), p. 920 - 930, doi: 10.1080/15384101.2014.1000112
• Stejskal, S; Stepka, K; Tesarova, L; Stejskal, K; Matejkova, M; Simara, P; Zdrahal, Z; Koutna, I, 2015: Cell cycle-dependent changes in H3K56ac in human cells. CELL CYCLE 14(24), p. 3851 - 3863, doi: 10.1080/15384101.2015.1106760
• Hrossova, D; Sikorsky, T; Potesil, D; Bartosovic, M; Pasulka, J; Zdrahal, Z; Stefl, R; Vanacova, S, 2015: RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3´-end extended forms of snRNAs. NUCLEIC ACIDS RESEARCH 43(8), p. 4236 - 4248
• Duskova, M; Kamenik, J; Sedo, O; Zdrahal, Z; Salakova, A; Karpiskova, R; Lacanin, I, 2015: Survival and growth of lactic acid bacteria in hot smoked dry sausages (non-fermented salami) with and without sensory deviations. FOOD CONTROL 50, p. 804 - 808, doi: 10.1016/j.foodcont.2014.10.030
• Botka, T; Ruzickova, V; Konecna, H; Pantucek, R; Rychlik, I; Zdrahal, Z; Petras, P; Doskar, J, 2015: Complete genome analysis of two new bacteriophages isolated from impetigo strains of Staphylococcus aureus. VIRUS GENES 51(1), p. 122 - 131, doi: 10.1007/s11262-015-1223-8
• Bartova, V; Barta, J; Brabcova, A; Zdrahal, Z; Horackova, V, 2015: Amino acid composition and nutritional value of four cultivated South American potato species. JOURNAL OF FOOD COMPOSITION AND ANALYSIS 40, p. 78 - 85, doi: 10.1016/j.jfca.2014.12.006
• Lattova, E; Brabcova, A; Bartova, V; Potesil, D; Barta, J; Zdrahal, Z, 2015: N-Glycome Profiling of Patatins from Different Potato Species of Solanum Genus. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 63(12), p. 3243 - 3250, doi: 10.1021/acs.jafc.5b00426
• Krejci, J; Stixova, L; Pagacova, E; Legartova, S; Kozubek, S; Lochmanova, G; Zdrahal, Z; Sehnalova, P; Dabravolski, S; Hejatko, J; Bartova, E, 2015: Post-Translational Modifications of Histones in Human Sperm. JOURNAL OF CELLULAR BIOCHEMISTRY 116(10), p. 2195 - 2209, doi: 10.1002/jcb.25170
• Dadakova, K; Havelkova, M; Kurkova, B; Tlolkova, I; Kasparovsky, T; Zdrahal, Z; Lochman, J, 2015: Proteome and transcript analysis of Vitis vinifera cell cultures subjected to Botrytis cinerea infection. JOURNAL OF PROTEOMICS 119, p. 143 - 153, doi: 10.1016/j.jprot.2015.02.001
• Pernikarova, V; Sedlacek, V; Potesil, D; Prochazkova, I; Zdrahal, Z; Bouchal, P; Kucera, I, 2015: Proteomic responses to a methyl viologen-induced oxidative stress in the wild type and FerB mutant strains of Paracoccus denitrificans. JOURNAL OF PROTEOMICS 125, p. 68 - 75, doi: 10.1016/j.jprot.2015.05.002
• Kamenik, J; Duskova, M; Sedo, O; Salakova, A; Pavlik, Z; Zdrahal, Z; Karpiskova, R, 2015: Lactic acid bacteria in hot smoked dry sausage (non-fermented salami): Thermal resistance of Weissella viridescens strains isolated from hot smoked dry sausages. LWT-FOOD SCIENCE AND TECHNOLOGY 61(2), p. 492 - 495, doi: 10.1016/j.lwt.2014.12.012
• Hrossova, D; Sikorsky, T; Potesil, D; Bartosovic, M; Pasulka, J; Zdrahal, Z; Stefl, R; Vanacova, S, 2015: RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3 ´-end extended forms of snRNAs. NUCLEIC ACIDS RESEARCH 43(8), p. 4236 - 4248, doi: 10.1093/nar/gkv240

2014

• Racil, Z; Razga, F; Klamova, H; Voglova, J; Belohlavkova, P; Malaskova, L; Potesil, D; Muzik, J; Zackova, D; Polakova, KM; Zdrahal, Z; Malakova, J; Suttnar, J; Dyr, J; Mayer, J, 2014: No clinical evidence for performing trough plasma and intracellular imatinib concentrations monitoring in patients with chronic myelogenous leukaemia. HEMATOLOGICAL ONCOLOGY 32(2), p. 87 - 93, doi: 10.1002/hon.2091
• Potesil, D; Stejskal, S; Borsky, M; Simara, P; Havelkova, M; Razga, F; Koutna, I; Dvorakova, D; Mayer, J; Racil, Z; Zdrahal, Z, 2014: Determination of Imatinib in the Blood Cells of Chronic Myelogenous Leukemia Patients by Ion-Trap Mass Spectrometry. ANALYTICAL LETTERS 47(6), p. 944 - 957, doi: 10.1080/00032719.2013.860538
• Tumova, L; Pombinho, AR; Vojtechova, M; Stancikova, J; Gradl, D; Krausova, M; Sloncova, E; Horazna, M; Kriz, V; Machonova, O; Jindrich, J; Zdrahal, Z; Bartunek, P; Korinek, V, 2014: Monensin Inhibits Canonical Wnt Signaling in Human Colorectal Cancer Cells and Suppresses Tumor Growth in Multiple Intestinal Neoplasia Mice. MOLECULAR CANCER THERAPEUTICS 13(4), p. 812 - 822, doi: 10.1158/1535-7163.MCT-13-0625
• Legartova, S; Kozubek, S; Franek, M; Zdrahal, Z; Lochmanova, G; Martinet, N; Bartova, E, 2014: Cell differentiation along multiple pathways accompanied by changes in histone acetylation status. BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE 92(2), p. 85 - 93, doi: 10.1139/bcb-2013-0082
• Hafidh, S; Potesil, D; Fila, J; Fecikova, J; Capkova, V; Zdrahal, Z; Honys, D, 2014: In search of ligands and receptors of the pollen tube: the missing link in pollen tube perception. BIOCHEMICAL SOCIETY TRANSACTIONS 42, p. 388 - 394, doi: 10.1042/BST20130204
• de Groot, REA; Ganji, RS; Bernatik, O; Lloyd-Lewis, B; Seipel, K; Sedova, K; Zdrahal, Z; Dhople, VM; Dale, TC; Korswagen, HC; Bryja, V, 2014: Huwe1-Mediated Ubiquitylation of Dishevelled Defines a Negative Feedback Loop in the Wnt Signaling Pathway. SCIENCE SIGNALING 7(317), doi: 10.1126/scisignal.2004985
• Lacina, K; Konhefr, M; Novotny, J; Potesil, D; Zdrahal, Z; Skladal, P, 2014: Combining ferrocene, thiophene and a boronic acid: a hybrid ligand for reagentless electrochemical sensing of cis-diols. TETRAHEDRON LETTERS 55(21), p. 3235 - 3238, doi: 10.1016/j.tetlet.2014.04.036
• Balazova, T; Sedo, O; Stefanic, P; Mandic-Mulec, I; Vos, M; Zdrahal, Z, 2014: Improvement in Staphylococcus and Bacillus strain differentiation by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry profiling by using microwave-assisted enzymatic digestion. RAPID COMMUNICATIONS IN MASS SPECTROMETRY 28(17), p. 1855 - 1861, doi: 10.1002/rcm.6966
• Bernatik, O; Sedova, K; Schille, C; Ganji, RS; Cervenka, I; Trantirek, L; Schambony, A; Zdrahal, Z; Bryja, V, 2014: Functional Analysis of Dishevelled-3 Phosphorylation Identifies Distinct Mechanisms Driven by Casein Kinase 1 epsilon and Frizzled5. JOURNAL OF BIOLOGICAL CHEMISTRY 289(34), p. 23520 - 23533, doi: 10.1074/jbc.M114.590638
• Pekar, S; Sedo, O; Liznarova, E; Korenko, S; Zdrahal, Z, 2014: David and Goliath: potent venom of an ant-eating spider (Araneae) enables capture of a giant prey. NATURWISSENSCHAFTEN 101(7), p. 533 - 540, doi: 10.1007/s00114-014-1189-8
• Balazova, T; Makovcova, J; Sedo, O; Slany, M; Faldyna, M; Zdrahal, Z, 2014: The influence of culture conditions on the identification of Mycobacterium species by MALDI-TOF MS profiling. FEMS MICROBIOLOGY LETTERS 353(1), p. 77 - 84, doi: 10.1111/1574-6968.12408
• Vorac, A; Sedo, O; Havlis, J; Zdrahal, Z, 2014: A simplified method for peptide de novo sequencing using O-18 labeling. EUROPEAN JOURNAL OF MASS SPECTROMETRY 20(3), p. 255 - 260, doi: 10.1255/ejms.1277

2013

• Stejskal, K; Potesil, D; Zdrahal, Z, 2013: Suppression of Peptide Sample Losses in Autosampler Vials. JOURNAL OF PROTEOME RESEARCH 12(6), p. 3057 - 3062, doi: 10.1021/pr400183v
• Pantucek, R; Svec, P; Dajcs, JJ; Machova, I; Cernohlavkova, J; Sedo, O; Gelbicova, T; Maslanova, I; Doskar, J; Zdrahal, Z; Ruzickova, V; Sedlacek, I, 2013: Staphylococcus petrasii sp nov including S-petrasii subsp petrasii subsp nov and S-petrasii subsp croceilyticus subsp nov., isolated from human clinical specimens and human ear infections. SYSTEMATIC AND APPLIED MICROBIOLOGY 36(2), p. 90 - 95, doi: 10.1016/j.syapm.2012.11.004
• Simara, P; Stejskal, S; Koutna, I; Potesil, D; Tesarova, L; Potesilova, M; Zdrahal, Z; Mayer, J, 2013: Apoptosis in chronic myeloid leukemia cells transiently treated with imatinib or dasatinib is caused by residual BCR-ABL kinase inhibition. AMERICAN JOURNAL OF HEMATOLOGY 88(5), p. 385 - 393, doi: 10.1002/ajh.23419
• Legartova, S; Jugova, A; Stixova, L; Kozubek, S; Fojtova, M; Zdrahal, Z; Lochmanova, G; Bartova, E, 2013: Epigenetic aspects of HP1 exchange kinetics in apoptotic chromatin. BIOCHIMIE 95(2), p. 167 - 179, doi: 10.1016/j.biochi.2012.09.027
• Kucera, J; Bouchal, P; Lochman, J; Potesil, D; Janiczek, O; Zdrahal, Z; Mandl, M, 2013: Ferrous iron oxidation by sulfur-oxidizing Acidithiobacillus ferrooxidans and analysis of the process at the levels of transcription and protein synthesis. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 103(4), p. 905 - 919, doi: 10.1007/s10482-012-9872-2
• Matulova, M; Varmuzova, K; Sisak, F; Havlickova, H; Babak, V; Stejskal, K; Rychlik, ZZI; Rychlik, I, 2013: Chicken innate immune response to oral infection with Salmonella enterica serovar Enteritidis. VETERINARY RESEARCH 44, doi: 10.1186/1297-9716-44-37
• Pekar, S; Michalko, R; Korenko, S; Sedo, O; Liznarova, E; Sentenska, L; Zdrahal, Z, 2013: Phenotypic integration in a series of trophic traits: tracing the evolution of myrmecophagy in spiders (Araneae). ZOOLOGY 116(1), p. 27 - 35, doi: 10.1016/j.zool.2012.05.006
• Zd´arska, M; Zatloukalova, P; Benitez, M; Sedo, O; Potesil, D; Novak, O; Svacinova, J; Pesek, B; Malbeck, J; Vasickova, J; Zdrahal, Z; Hejatko, J, 2013: Proteome Analysis in Arabidopsis Reveals Shoot- and Root-Specific Targets of Cytokinin Action and Differential Regulation of Hormonal Homeostasis. PLANT PHYSIOLOGY 161(2), p. 918 - 930, doi: 10.1104/pp.112.202853
• Sedo, O; Nemec, A; Krizova, L; Kacalova, M; Zdrahal, Z, 2013: Improvement of MALDI-TOF MS profiling for the differentiation of species within the Acinetobacter calcoaceticus-Acinetobacter baumannii complex. SYSTEMATIC AND APPLIED MICROBIOLOGY 36(8), p. 572 - 578, doi: 10.1016/j.syapm.2013.08.001
• Cincarova, L; Zdrahal, Z; Fajkus, J, 2013: New perspectives of valproic acid in clinical practice. EXPERT OPINION ON INVESTIGATIONAL DRUGS 22(12), p. 1535 - 1547, doi: 10.1517/13543784.2013.853037
• Konecna, H; Fridrichova, D; Lochmanova, G; Barta, J; Zdrahal, Z, 2013: Preventing the mixed detergent micelle effect in two-dimensional electrophoresis on Tris-Tricine gels. ELECTROPHORESIS 34(13), p. 1969 - 1971, doi: 10.1002/elps.201300084
• Sedo, O; Vavrova, A; Vad´urova, M; Tvrzova, L; Zdrahal, Z, 2013: The influence of growth conditions on strain differentiation within the Lactobacillus acidophilus group using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry profiling. RAPID COMMUNICATIONS IN MASS SPECTROMETRY 27(24), p. 2729 - 2736, doi: 10.1002/rcm.6741
• Ustianenko, D; Hrossova, D; Potesil, D; Chalupnikova, K; Hrazdilova, K; Pachernik, J; Cetkovska, K; Uldrijan, S; Zdrahal, Z; Vanacova, S, 2013: Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs. RNA-A PUBLICATION OF THE RNA SOCIETY 19(12), p. 1632 - 1638, doi: 10.1261/rna.040055.113
• Stary, T; Ochodnicka, S; Zdrahal, Z; Kasparovsky, T; Lochman, J, 2013: Effects of biotic stress on the proteome of Solanum lycopersicum. FEBS JOURNAL 280, p. 236 - 236
• Lochman, J; Oboril, M; Klempova, J; Ptackova, N; Zdrahal, Z; Kasparovsky, T, 2013: Modifications of elicitin biological activity by surface charge altering. FEBS JOURNAL 280, p. 235 - 235
• Stejskal, K; Potesil, D; Zdrahal, Z, 2013: SUPPRESION OF PROTEIN SAMPLE LOSSES IN AUTOSAMPLER VIALS. CHEMICKE LISTY 107, p. S324 - S326

2012

• HERNYCHOVA, L.;M. NEKULOVA;D. POTESIL;E. MICHALOVA;Z. ZDRAHAL;B. VOJTESEK;J. HOLCAKOVA., 2012: A combined immunoprecipitation and mass spectrometric approach to determine ?Np63-interacting partners. KLINICKA ONKOLOGIE
• Barta, J; Bartova, V; Zdrahal, Z; Sedo, O, 2012: Cultivar Variability of Patatin Biochemical Characteristics: Table versus Processing Potatoes (Solanum tuberosum L.). JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 60(17), p. 4369 - 4378, doi: 10.1021/jf3003448
• Verner, J; Kabathova, J; Tomancova, A; Pavlova, S; Tichy, B; Mraz, M; Brychtova, Y; Krejci, M; Zdrahal, Z; Trbusek, M; Volejnikova, J; Sedlacek, P; Doubek, M; Mayer, J; Pospisilova, S, 2012: Gene expression profiling of acute graft-vs-host disease after hematopoietic stem cell transplantation. EXPERIMENTAL HEMATOLOGY 40(11), p. 899 - 905, doi: 10.1016/j.exphem.2012.06.011
• Duskova, M; Sedo, O; Ksicova, K; Zdrahal, Z; Karpiskova, R, 2012: Identification of lactobacilli isolated from food by genotypic methods and MALDI-TOF MS. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY 159(2), p. 107 - 114, doi: 10.1016/j.ijfoodmicro.2012.07.029
• Kucera, J; Bouchal, P; Cerna, H; Potesil, D; Janiczek, O; Zdrahal, Z; Mandl, M, 2012: Kinetics of anaerobic elemental sulfur oxidation by ferric iron in Acidithiobacillus ferrooxidans and protein identification by comparative 2-DE-MS/MS. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 101(3), p. 561 - 573, doi: 10.1007/s10482-011-9670-2
• Lochmanova, G; Jedlickova, L; Potesil, D; Tomancova, A; Verner, J; Pospisilova, S; Doubek, M; Mayer, J; Zdrahal, Z, 2012: Potential biomarkers for early detection of acute graft-versus-host disease. PROTEOMICS CLINICAL APPLICATIONS 6(42223), p. 351 - 363, doi: 10.1002/prca.201100104
• Pekar, S; Smerda, J; Hruskova, M; Sedo, O; Muster, C; Cardoso, P; Zdrahal, Z; Korenko, S; Bures, P; Liznarova, E; Sentenska, L, 2012: Prey-race drives differentiation of biotypes in ant-eating spiders. JOURNAL OF ANIMAL ECOLOGY 81(4), p. 838 - 848, doi: 10.1111/j.1365-2656.2012.01957.x
• CUMOVA, J.;L. JEDLICKOVA;D. POTESIL;O. SEDO;K. STEJSKAL;A. POTACOVA;Z. ZDRAHAL;R. HAJEK., 2012: Srovnavaci proteomicka analyza krevni plazmy pacientu s mnohocetnym myelomem lecenych rezimy s bortezomibem. KLINICKA ONKOLOGIE 25, p. 17 - 25
• Stepanova, H; Pavlova, B; Stromerova, N; Ondrackova, P; Stejskal, K; Slana, I; Zdrahal, Z; Pavlik, I; Faldyna, M, 2012: Different immune response of pigs to Mycobacterium avium subsp avium and Mycobacterium avium subsp hominissuis infection. VETERINARY MICROBIOLOGY 159(42097), p. 343 - 350, doi: 10.1016/j.vetmic.2012.04.002
• HERNYCHOVA, L.;M. NEKULOVA;D. POTESIL;E. MICHALOVA;Z. ZDRAHAL;B. VOJTESEK;J. HOLCAKOVA, 2012: Comparative Plasma Proteomic Analysis of Patients with Multiple Myeloma Treated with Bortezomib-based Regimens. KLINICKA ONKOLOGIE , p. 17 - 25
• Sedo, O; Marova, I; Zdrahal, Z, 2012: Beer fingerprinting by Matrix-Assisted Laser Desorption-Ionisation-Time of Flight Mass Spectrometry. FOOD CHEMISTRY 135(2), p. 473 - 478, doi: 10.1016/j.foodchem.2012.05.021
• Cincarova, L; Lochmanova, G; Novakova, K; Sultesova, P; Konecna, H; Fajkusova, L; Fajkus, J; Zdrahal, Z, 2012: A combined approach for the study of histone deacetylase inhibitors. MOLECULAR BIOSYSTEMS 8(11), p. 2937 - 2945, doi: 10.1039/c2mb25136a
• Dokladal, L; Oboril, M; Stejskal, K; Zdrahal, Z; Ptackova, N; Chaloupkova, R; Damborsky, J; Kasparovsky, T; Jeandroz, S; Zd´arska, M; Lochman, J, 2012: Physiological and proteomic approaches to evaluate the role of sterol binding in elicitin-induced resistance. JOURNAL OF EXPERIMENTAL BOTANY 63(5), p. 2203 - 2215, doi: 10.1093/jxb/err427
• Konecna, H; Muller, L; Dosoudilova, H; Potesil, D; Bursikova, J; Sedo, O; Marova, I; Zdrahal, Z, 2012: Exploration of Beer Proteome Using OFFGEL Prefractionation in Combination with Two-Dimensional Gel Electrophoresis with Narrow pH Range Gradients. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 60(10), p. 2418 - 2426, doi: 10.1021/jf204475e

2011

• Gomila, M; Tvrzova, L; Teshim, A; Sedlacek, I; Gonzalez-Escalona, N; Zdrahal, Z; Sedo, O; Gonzalez, JF; Bennasar, A; Moore, ERB; Lalucat, J; Murialdo, SE, 2011: Achromobacter marplatensis sp nov., isolated from a pentachlorophenol-contaminated soil. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 61, p. 2231 - 2237, doi: 10.1099/ijs.0.025304-0
• Bouchal, P; Vyhlidalova, T; Struharova, I; Zdrahal, Z; Kucera, I, 2011: Fe/Mn superoxide dismutase-encoding gene in Paracoccus denitrificans is induced by azide and expressed independently of the FNR-type regulators. FOLIA MICROBIOLOGICA 56(1), p. 13 - 17, doi: 10.1007/s12223-011-0007-3
• Novakova, K; Sedo, O; Zdrahal, Z, 2011: Mass Spectrometry Characterization of Plant Phosphoproteins. CURRENT PROTEIN & PEPTIDE SCIENCE 12(2), p. 112 - 125
• Sedo, O; Vorac, A; Zdrahal, Z, 2011: Optimization of mass spectral features in MALDI-TOF MS profiling of Acinetobacter species. SYSTEMATIC AND APPLIED MICROBIOLOGY 34(1), p. 30 - 34, doi: 10.1016/j.syapm.2010.11.008
• Cumova, J; Potacova, A; Zdrahal, Z; Hajek, R, 2011: Proteomic Analysis in Multiple Myeloma Research. MOLECULAR BIOTECHNOLOGY 47(1), p. 83 - 93, doi: 10.1007/s12033-010-9326-x
• Sedo, O; Sedlacek, I; Zdrahal, Z, 2011: SAMPLE PREPARATION METHODS FOR MALDI-MS PROFILING OF BACTERIA. MASS SPECTROMETRY REVIEWS 30(3), p. 417 - 434, doi: 10.1002/mas.20287

2010

• Nemec, A; Musilek, M; Sedo, O; De Baere, T; Maixnerova, M; van der Reijden, TJK; Zdrahal, Z; Vaneechoutte, M; Dijkshoorn, L, 2010: Acinetobacter bereziniae sp nov and Acinetobacter guillouiae sp nov., to accommodate Acinetobacter genomic species 10 and 11, respectively. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 60, p. 896 - 903, doi: 10.1099/ijs.0.013656-0
• Literakova, P; Lochman, J; Zdrahal, Z; Prokop, Z; Mikes, V; Kasparovsky, T, 2010: Determination of Capsidiol in Tobacco Cells Culture by HPLC. JOURNAL OF CHROMATOGRAPHIC SCIENCE 48(5 I), p. 436 - 440
• Bouchal, P; Struharova, I; Budinska, E; Sedo, O; Vyhlidalova, T; Zdrahal, Z; van Spanning, R; Kucera, I, 2010: Unraveling an FNR based regulatory circuit in Paracoccus denitrificans using a proteomics-based approach. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 1804(6), p. 1350 - 1358, doi: 10.1016/j.bbapap.2010.01.016
• Stopkova, R; Zdrahal, Z; Ryba, S; Sedo, O; Sandera, M; Stopka, P, 2010: Novel OBP genes similar to hamster Aphrodisin in the bank vole, Myodes glareolus. BMC GENOMICS 11(45), doi: 10.1186/1471-2164-11-45

• Zpracování vedlejších produktů z lisování semen olejnin na nové výrobky s nutričními a zdravotními přínosy, Ministerstvo zemědělství ČR, 2019 - 2023
• Centrum experimentální biologie rostlin (CZ.02.1.01/0.0/0.0/16_019/0000738), Ministerstvo školství, mládeže a tělovýchovy ČR, 2018 - 2023
• European Proteomics Infrastructure Consortium providing Access, Evropská unie, 2019 - 2022
• Funkce HDAC1 v T-buněčných lymfomech, Grantová agentura ČR, 2019 - 2021
• CIISB - Česká infrastruktura pro integrativní strukturní biologii pro lidské zdraví (CZ.02.1.01/0.0/0.0/16_013/0001776), Ministerstvo školství, mládeže a tělovýchovy ČR, 2017 - 2021
• Czech Infrastructure for Integrative Structural Biology (LM2015043), Ministerstvo školství, mládeže a tělovýchovy ČR, 2016 - 2019
• Center of novel approaches to bioanalysis and molecular diagnostics (P206/12/G151), Czech Science Foundation - Projects for promotion of excellence in basic research, 2012 - 2018
• RNA vazebné proteiny účastnící se translační represe skladovaných transkriptů během vývoje samčího gametofytu (GA15-16050S), Grantová agentura ČR, 2015 - 2017
• Signalizace mezi pylem a pestíkem předcházející oplození, úloha sekretovaných signálů působících na kratší a delší vzdálenost (GA15-22720S), Grantová agentura ČR, 2015 - 2017
• Genetická diverzita a fylogeneze rodu Acinetobacter v přírodních ekosystémech (GA13-26693S), Grantová agentura ČR, 2013 - 2016
• CEITEC - Central European Institute of Technology (CZ.1.05/1.1.00/02.0068), Ministerstvo školství, mládeže a tělovýchovy ČR, 2011 - 2015
• Metody tlumení produkčních chorob skotu - BVD-MD a paratuberkulóza (QI101A094), Ministerstvo zemědělství ČR, 2010 - 2014
• Funkční charakterizace unikátních zásobních ribonukleoproteinových částic v pylu (GAP501/11/1462), Grantová agentura ČR, 2011 - 2014
• Evaluation of wild potato tuber proteins potential for utilization in potato (Solanum tuberosum L.) breeding and biotechnological applications (QI91A069), Ministerstvo zemědělství ČR, 2009 - 2013