Pushing the frontiers of magnetic resonance spectroscopy for biotechnology and materials engineering

Supervisor Prof. Radek Marek, Ph.D.
Research Group Structure of Biosystems and Molecular Materials

Magnetic resonance (MR) spectroscopy represents one of the most powerful and versatile methods for structural analysis in biology, chemistry, and physics. While nuclear magnetic resonance (NMR) investigates the properties of atomic nuclei, electron paramagnetic resonance (EPR) investigates systems containing unpaired electrons. These two methods are closely interconnected in the NMR spectroscopy of paramagnetic substances, commonly referred to as paramagnetic NMR spectroscopy (pNMR). The development of pNMR methods depends not only on advances in instrumentation but also on the development of new concepts and methods for the prediction and interpretation of pNMR parameters. These parameters can currently be predicted using advanced relativistic quantum-chemical methods, in particular density functional theory (DFT). In biotechnological applications, it is necessary to account for the effects of molecular dynamics and the surrounding environment in theoretical predictions of paramagnetic systems. This can be achieved by combining machine-learning-based force fields, molecular dynamics simulations, and relativistic quantum-chemical methods representing the current state of the art. In materials research, it is necessary to account for solid-state conditions. For designed systems, this requires periodic DFT calculations including relativistic effects and different spin states. For a number of systems, it is also important to account for correlated motions and non-adiabatic effects in photochemically excited systems.

Within the projects currently pursued in the area of paramagnetic NMR spectroscopy, we focus on the development of ruthenium-based anticancer metallodrugs and their carriers, as well as on the development of catalytic systems based on metal-organic frameworks.

See list of topics
  1. Assembly and maturation of flaviviruses
  2. Cell entry and genome delivery of non-enveloped viruses
  3. Design principles of fusogenic proteins for lipid vesicles
  4. Development of advanced MRI techniques for functional brain mapping
  5. Frascan II: methods and applications
  6. How whole-genome triplication shaped desert adaptation in Brassiceae
  7. Integrating osteological and biomolecular evidence to investigate chromosomal aneuploidies in past populations
  8. Lipid nanoparticles in drug delivery
  9. Method development in palaeoproteomics
  10. Next-generation anticancer therapies based on metallodrugs
  11. One protein to rule them all: Decoding the multifunctionality of paramyxovirus matrix proteins
  12. Pushing the frontiers of magnetic resonance spectroscopy for biotechnology and materials engineering
  13. Regulation of drought stress memory and resilience in Brassica napus plants
  14. Retrogene evolution in Brassicaceae: The roles of genomic context and polyploid history
  15. RNA-associated mechanisms in Polycomb-mediated epigenetic silencing
  16. Tracing brain disease back to developmental decisions
  17. Translation Control